object_based_datastore #65
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"""Definition of datastore minio implementation."""
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from __future__ import annotations
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import logging
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import os
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from collections import OrderedDict
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from hashlib import md5
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from io import BytesIO
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from traceback import format_exc
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import torch
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from minio import Minio
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from PIL import Image
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from shared.utils import check_env
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from .datastore_interface import DatastoreInterface
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class DatastoreMinio(DatastoreInterface):
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"""Datastore interface."""
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def __init__(self):
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# ensure necessary env vars available
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var_list = {
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'MINIO_ENDPOINT',
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'MINIO_ACCESS_KEY',
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'MINIO_SECRET_KEY',
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'MINIO_BUCKET_NAME',
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}
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check_env(var_list)
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# prepare interval variables
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self._client: Minio | None = None
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self._bucket_name: str | None = None
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def connect(self) -> None:
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"""Connect to Minio server."""
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# prepare arguments
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minio_endpoint = str(os.getenv('MINIO_ENDPOINT'))
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minio_access_key = str(os.getenv('MINIO_ACCESS_KEY'))
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minio_secret_key = str(os.getenv('MINIO_SECRET_KEY'))
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minio_bucket_name = str(os.getenv('MINIO_BUCKET_NAME'))
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# connect client
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client = Minio(
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endpoint=minio_endpoint,
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access_key=minio_access_key,
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secret_key=minio_secret_key,
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secure=False,
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)
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# ensure bucket exists
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if not client.bucket_exists(bucket_name=minio_bucket_name):
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logging.debug('creating bucket: %s', minio_bucket_name)
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client.make_bucket(bucket_name=minio_bucket_name)
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logging.debug('finished')
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# persist state
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self._client = client
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self._bucket_name = minio_bucket_name
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def close(self) -> None:
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"""Close connection to Minio server.
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N.B. Minio connection cannot be closed manually.
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"""
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self._client = None
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self._bucket_name = None
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def __enter__(self) -> DatastoreMinio:
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self.connect()
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return self
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def __exit__(self, exc_type, exc_val, exc_tb) -> None:
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if any(
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(
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exc_type is not None,
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exc_val is not None,
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exc_tb is not None,
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),
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):
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logging.error('error while exiting context')
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self.close()
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def _put(
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self,
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object_name: str,
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buffer: BytesIO,
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) -> None:
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"""Save in-memory buffer as object in Minio."""
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assert isinstance(object_name, str)
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assert len(object_name) > 0
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assert isinstance(buffer, BytesIO)
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assert isinstance(self._client, Minio)
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assert isinstance(self._bucket_name, str)
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# prepare for saving
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num_bytes = len(buffer.getvalue())
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buffer.seek(0)
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# send data to bucket
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try:
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self._client.put_object(
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bucket_name=self._bucket_name,
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object_name=object_name,
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length=num_bytes,
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data=buffer,
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)
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logging.debug('saved data to %s', object_name)
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except Exception as exc:
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logging.error('failed saving data to MinIO')
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raise exc
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def _get(
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self,
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object_name: str,
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) -> BytesIO:
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"""Get object from Minio as in-memory buffer."""
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assert isinstance(object_name, str)
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assert len(object_name) > 0
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assert isinstance(self._client, Minio)
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assert isinstance(self._bucket_name, str)
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try:
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# make request
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response = self._client.get_object(
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bucket_name=self._bucket_name,
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object_name=object_name,
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)
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assert response.status == 200
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# get buffer
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buffer = BytesIO()
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chunk_size = 2**14
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while chunk := response.read(chunk_size):
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buffer.write(chunk)
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buffer.seek(0)
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logging.debug('got %s', object_name)
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return buffer
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except Exception as exc:
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logging.error('failed getting data from MinIO')
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logging.debug(format_exc())
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raise exc
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finally:
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# close connection if established
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if 'response' in locals():
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response.close()
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response.release_conn()
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def _delete(
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self,
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object_name: str,
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) -> None:
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"""Delete object from Minio."""
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assert isinstance(object_name, str)
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assert len(object_name) > 0
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assert isinstance(self._client, Minio)
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assert isinstance(self._bucket_name, str)
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# remove object
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try:
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self._client.remove_object(
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bucket_name=self._bucket_name,
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object_name=object_name,
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)
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logging.debug('deleted %s', object_name)
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except Exception as exc:
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logging.error('failed deleting %s', object_name)
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logging.debug(format_exc())
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raise exc
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def put_image(
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self,
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image: Image.Image,
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) -> str:
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"""Put image in Minio."""
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assert isinstance(image, Image.Image)
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# save data to buffer
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buffer = BytesIO()
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image.save(buffer, 'png')
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# get md5 of buffer
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checksum = md5(buffer.getbuffer()).hexdigest()
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# build object path
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object_path = f'images/{checksum}'
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# send data to bucket
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self._put(
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object_name=object_path,
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buffer=buffer,
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)
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logging.debug('saved data to %s', object_path)
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return checksum
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def get_image(
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self,
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object_name: str,
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) -> Image.Image:
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"""Get image from Minio."""
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assert isinstance(object_name, str)
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assert len(object_name) > 0
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# build object path
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object_path = f'images/{object_name}'
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# get object from bucket
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buffer = self._get(
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object_name=object_path,
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)
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# convert data to image
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image = Image.open(buffer)
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logging.debug('got data from %s', object_path)
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return image
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def put_model(
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self,
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model: torch.nn.Module,
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) -> str:
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"""Put model in Minio."""
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assert isinstance(model, torch.nn.Module)
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# save data to buffer
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buffer = BytesIO()
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torch.save(model.state_dict(), buffer)
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# get md5 of image
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checksum = md5(buffer.getbuffer()).hexdigest()
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# build object path
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object_path = f'models/{checksum}'
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# send data to bucket
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self._put(
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object_name=object_path,
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buffer=buffer,
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)
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logging.debug('saved data to %s', object_path)
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return checksum
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def get_model(
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self,
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object_name: str,
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) -> OrderedDict:
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"""Get model data from Minio."""
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assert isinstance(object_name, str)
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assert len(object_name) > 0
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# build object path
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object_path = f'models/{object_name}'
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# get object from bucket
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buffer = self._get(
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object_name=object_path,
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)
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# convert data to model checkpoint
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model_content = torch.load(buffer)
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logging.debug('got data from %s', object_path)
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return model_content
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